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Cytochrome P450 2C19 Genotyping

CPT 81225
Synonyms
  • DME Genotyping

Test Details

Methodology

DNA analysis is performed by allele-specific real-time polymerase chain reactions (RT-PCR) to detect single-nucleotide polymorphisms (SNPs) within the CYP2C19 gene and to assign variant CYP2C19 *2, *3, *4, *5, *6, *7, *8, *9, *10, *17 and *35 alleles. *1 denotes detection of the reference (wild-type) sequence at the assessed alleles. No other variants in this gene are detected by this assay.

Result Turnaround Time

7 - 10 days

Turnaround time is defined as the usual number of days from the date of pickup of a specimen for testing to when the result is released to the ordering provider. In some cases, additional time should be allowed for additional confirmatory or additional reflex tests. Testing schedules may vary.

Related Documents

For more information, please view the literature below.

Informed Consent for Genetic Testing

Pharmacogenomics Test List

Use

Cytochrome P450 2C19 (CYP2C19) is a drug-metabolizing enzyme involved in the metabolism of several clinically important drugs including the platelet aggregation inhibitor clopidogrel, the tricyclic antidepressants amitriptyline and nortriptyline, the selective serotonin reuptake inhibitors citalopram and sertraline, and some proton pump inhibitors including omeprazole and pantoprazole. Individuals with some variant CYP2C19 alleles may experience a reduced therapeutic response and may be at risk for side effects from drugs that are metabolized by CPY2C19. CYP2C19 genotype information can be utilized to predict CYP2C19 metabolic phenotype, which can be used as an aid in determining a therapeutic strategy for drugs that are metabolized by CYP2C19. For example, the use of clopidogrel with an intermediate or poor metabolizer is associated with reduced platelet inhibition and an increased risk of cardiovascular complications, such as myocardial infarction, stroke, stent thrombosis and/or death, as compared with normal metabolizers. In these instances, alternative drugs may be considered. Ultrarapid metabolism is associated with lower platelet activity, but there is no association with higher bleeding risk.

Variation in the CYP2C19 gene can result in ultrarapid (UM), rapid (RM), normal (NM), intermediate (IM), likely intermediate (LIM), poor (PM) and likely poor (LPM) drug-metabolizing phenotypes. In general, relative to the *1 allele (normal function), the *17 allele has increased function, *9 and *10 alleles have decreased function, while *2, *3, *4, *5, *6, *7, *8 and *35 alleles have no function.

Limitations

The exact effect of a particular genotype on individual drugs can vary. In addition to genotype, the metabolism of drugs may be influenced by additional factors that include environmental, dietary and other medications; these factors and others should be considered prior to initialing a new therapy. All results must be interpreted in the context of other test results and clinical findings. Results do not rule out the possibility of other variant alleles in CYP2C19 or other variant alleles in other drug metabolism pathways. Patients should speak with their healthcare provider about the individual results of this test.

Molecular-based testing is highly accurate, but as in any laboratory test, rare diagnostic errors may occur.

This test was developed and its performance characteristics determined by Labcorp. It has not been cleared or approved by the Food and Drug Administration.

References

Hicks JK, Bishop JR, Sankuhl K, et al. Clinical pharmacogenetics implimentation consortium guideline (CPIC) for CYP2D6 and CYP2C19 genotypes and dosing of selective serotonin reuptake inhibitors. Clin Pharmacol Ther. 2015 Aug;98(2):127-134.25974703
Hicks JK, Sangkuhl K, Swen JJ, et al. Clinical pharmacogenetics implementation consortium guideline (CPIC) for CYP2D6 and CYP2C19 genotypes and dosing of tricyclic antidepressants: 2016 update. Clin Pharmacol Ther. 2017 Jul;102(1):37-44.27997040
Lee CR, Luzum JA, Sangkuhl K, et al. Clinical pharmacogenetics implementation consortium guideline (CPIC) for CYP2C19 genotype and clopidogrel therapy: 2022 update. Clin Pharmacol Ther. 2022 Nov;112(5):959-967.35034351
Lima JJ, Thomas CD, Barbarino J, et al. Clinical Pharmacogenetics Implementation Consortium (CPIC) Guideline for CYP2C19 and Proton Pump Inhibitor Dosing. Clin Pharmacol Ther. 2021 Jun;109(6):1417-1423.32770672
US Food and Drug Adminstration (FDA). Table of Pharmacogenetic Associations. FDA website: https://www.fda.gov/medical-devices/precision-medicine/table-pharmacogenetic-associations. Accessed April 2023.

Specimen Requirements

Specimen

Whole blood or Labcorp buccal swab kit (buccal swab collection kit contains 4 swabs and instructions for use of a buccal swab)

Volume

2 mL whole blood or one buccal swab kit (4 swabs)

Minimum Volume

1 mL whole blood or two buccal swabs

Container

Lavender-top (EDTA) tube or yellow-top (ACD) tube or Labcorp buccal swab kit

Collection Instructions

Collect specimen in a lavender-top (EDTA) or yellow-top (ACD) tube, or use a buccal swab kit (4 swabs). Ship whole blood specimen at room temperature or frozen. Ship buccal swab kit at room temperature.

Stability Requirements

Temperature

Period

Room temperature

Whole Blood: 28 days

Swabs: 2 Months

Refrigerated

Whole Blood: 28 days

Swabs: Unstable

Frozen

Whole Blood: 2 years

Swabs: Unstable

Storage Instructions

Maintain whole blood specimen at room temperature or refrigerated for 28 days or frozen for 2 years. Maintain buccal swabs at room temperature for 2 months.

Causes for Rejection

Quantity not sufficient for analysis; improper container; single buccal swab; wet buccal swab; buccal swabs without outer collection envelope; severely damaged buccal swab envelope; buccal swab envelope received open; frozen glass tube

LOINC® Map

Order Code Order Code Name Order Loinc Result Code Result Code Name UofM Result LOINC
512212 Cytochrome P450 2C19 Genotype 57132-3 512206 2C19 Genotype: 57132-3
512212 Cytochrome P450 2C19 Genotype 57132-3 512207 2C19 Metabolic Activity: 79714-2
512212 Cytochrome P450 2C19 Genotype 57132-3 512208 Director Review: 72486-4
512212 Cytochrome P450 2C19 Genotype 57132-3 512141 Interpretation: 56850-1
512212 Cytochrome P450 2C19 Genotype 57132-3 512142 CYP2C19 Information: 62364-5
512212 Cytochrome P450 2C19 Genotype 57132-3 000000 MGRM Informed Consent Review N/A
Order Code512212
Order Code NameCytochrome P450 2C19 Genotype
Order Loinc57132-3
Result Code512206
Result Code Name2C19 Genotype:
UofM
Result LOINC57132-3
Order Code512212
Order Code NameCytochrome P450 2C19 Genotype
Order Loinc57132-3
Result Code512207
Result Code Name2C19 Metabolic Activity:
UofM
Result LOINC79714-2
Order Code512212
Order Code NameCytochrome P450 2C19 Genotype
Order Loinc57132-3
Result Code512208
Result Code NameDirector Review:
UofM
Result LOINC72486-4
Order Code512212
Order Code NameCytochrome P450 2C19 Genotype
Order Loinc57132-3
Result Code512141
Result Code NameInterpretation:
UofM
Result LOINC56850-1
Order Code512212
Order Code NameCytochrome P450 2C19 Genotype
Order Loinc57132-3
Result Code512142
Result Code NameCYP2C19 Information:
UofM
Result LOINC62364-5
Order Code512212
Order Code NameCytochrome P450 2C19 Genotype
Order Loinc57132-3
Result Code000000
Result Code NameMGRM Informed Consent Review
UofM
Result LOINCN/A