Test Details
Methodology
DNA analysis is performed by allele-specific real-time polymerase chain reactions (RT-PCR) to detect single-nucleotide polymorphisms (SNPs) and deletion within the CYP2C9 gene and to assign variant CYP2C9 *2, *3, *5, *6, *8, *11 and *13 alleles. *1 denoted detection of the reference (wild-type) sequence at the assessed alleles. No other variants in this gene are detected by this assay.
Result Turnaround Time
7 - 10 days
Turnaround time is defined as the usual number of days from the date of pickup of a specimen for testing to when the result is released to the ordering provider. In some cases, additional time should be allowed for additional confirmatory or additional reflex tests. Testing schedules may vary.
Use
Cytochrome P450 2C9 (CYP2C9) is a drug-metabolizing enzyme involved in the metabolism of several clinically important drugs, including warfarin, phenytoin, siponimod and some nonsteroidal anti-inflammatories. Individuals with some variant CYP2C9 alleles may experience a reduced therapeutic response and may be at risk for side effects from drugs that are metabolized by CYP2C9. CYP2C9 genotype information can be utilized to predict CYP2C9 metabolic phenotype, which can be used as an aid in determining a therapeutic strategy for drugs that are metabolized by CYP2C9. For example, CYP2C9 poor metabolizers mat experience increased concentrations of a drug with a reduced or absent therapeutic response. Warfarin metabolism is reduced by 30-50% by *2 and 90% by *3 alleles: individuals with at least one copy of *2 or *3 have an increased risk of bleeding compared to individuals without *2 or *3. In these instances, a lower warfarin maintenance dose may be required or alternative drugs may be considered.
Variation in the CYP2C9 gene can result in normal (NM), intermediate (IM) and poor (PM) drug-metabolizing phenotypes. In general, relative to the *1 allele (normal function), *2, *5, *8 and *11 alleles have decreased function, while *3, *6 and *13 alleles have no function.
Limitations
The exact effect of a particular genotype on individual drugs can vary. In addition to genotype, the metabolism of drugs may be influenced by additional factors that include environmental, dietary and other medications; these factors and others should be considered prior to initialing a new therapy. All results must be interpreted in the context of other test results and clinical findings. Results do not rule out the possibility of other variant alleles in CYP2C9 or other variant alleles in other drug metabolism pathways. Patients should speak with their healthcare provider about the individual results of this test.
Molecular-based testing is highly accurate, but as in any laboratory test, rare diagnostic errors may occur.
This test was developed and its performance characteristics determined by Labcorp. It has not been cleared or approved by the Food and Drug Administration.
References
Specimen Requirements
Specimen
Whole blood or Labcorp buccal swab kit (buccal swab collection kit contains 4 swabs and instructions for use of a buccal swab)
Volume
2 mL whole blood or one buccal swab kit (4 swabs)
Minimum Volume
1 mL whole blood or two buccal swabs
Container
Lavender-top (EDTA) tube or yellow-top (ACD) tube or Labcorp buccal swab kit
Collection Instructions
Collect specimen in a lavender-top (EDTA) or yellow-top (ACD) tube, or use a buccal swab kit (4 swabs). Ship whole blood specimen at room temperature or frozen. Ship buccal swab kit at room temperature.
Stability Requirements
Temperature | Period |
---|---|
Room temperature | Whole Blood: 28 days Swabs: 2 Months |
Refrigerated | Whole Blood: 28 days Swabs: Unstable |
Frozen | Whole Blood: 2 years Swabs: Unstable |
Storage Instructions
Maintain whole blood specimen at room temperature or refrigerated for 28 days or frozen for 2 years. Maintain buccal swabs at room temperature for 2 months.
Causes for Rejection
Quantity not sufficient for analysis; improper container; single buccal swab; wet buccal swab; buccal swabs without outer collection envelope; severely damaged buccal swab envelope; buccal swab envelope received open; frozen glass tube
LOINC® Map
Order Code | Order Code Name | Order Loinc | Result Code | Result Code Name | UofM | Result LOINC |
---|---|---|---|---|---|---|
512143 | Cytochrome P450 2C9 Genotyping | 93196-4 | 512144 | 2C9 Genotype: | 46724-1 | |
512143 | Cytochrome P450 2C9 Genotyping | 93196-4 | 512151 | 2C9 Metabolic Activity: | 79716-7 | |
512143 | Cytochrome P450 2C9 Genotyping | 93196-4 | 512201 | Director Review: | 72486-4 | |
512143 | Cytochrome P450 2C9 Genotyping | 93196-4 | 512158 | Interpretation: | 56850-1 | |
512143 | Cytochrome P450 2C9 Genotyping | 93196-4 | 512159 | CYP2C9 Information: | 62364-5 | |
512143 | Cytochrome P450 2C9 Genotyping | 93196-4 | 000000 | MGRM Informed Consent Review | N/A | |
Order Code | 512143 | |||||
Order Code Name | Cytochrome P450 2C9 Genotyping | |||||
Order Loinc | 93196-4 | |||||
Result Code | 512144 | |||||
Result Code Name | 2C9 Genotype: | |||||
UofM | ||||||
Result LOINC | 46724-1 | |||||
Order Code | 512143 | |||||
Order Code Name | Cytochrome P450 2C9 Genotyping | |||||
Order Loinc | 93196-4 | |||||
Result Code | 512151 | |||||
Result Code Name | 2C9 Metabolic Activity: | |||||
UofM | ||||||
Result LOINC | 79716-7 | |||||
Order Code | 512143 | |||||
Order Code Name | Cytochrome P450 2C9 Genotyping | |||||
Order Loinc | 93196-4 | |||||
Result Code | 512201 | |||||
Result Code Name | Director Review: | |||||
UofM | ||||||
Result LOINC | 72486-4 | |||||
Order Code | 512143 | |||||
Order Code Name | Cytochrome P450 2C9 Genotyping | |||||
Order Loinc | 93196-4 | |||||
Result Code | 512158 | |||||
Result Code Name | Interpretation: | |||||
UofM | ||||||
Result LOINC | 56850-1 | |||||
Order Code | 512143 | |||||
Order Code Name | Cytochrome P450 2C9 Genotyping | |||||
Order Loinc | 93196-4 | |||||
Result Code | 512159 | |||||
Result Code Name | CYP2C9 Information: | |||||
UofM | ||||||
Result LOINC | 62364-5 | |||||
Order Code | 512143 | |||||
Order Code Name | Cytochrome P450 2C9 Genotyping | |||||
Order Loinc | 93196-4 | |||||
Result Code | 000000 | |||||
Result Code Name | MGRM Informed Consent Review | |||||
UofM | ||||||
Result LOINC | N/A |